BOTTARO, SANDRO

BOTTARO, SANDRO  

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Risultati 1 - 20 di 36 (tempo di esecuzione: 0.03 secondi).
Titolo Data di pubblicazione Autore(i) File
Accuracy of the pseudopotential approximation in ab initio theoretical spectroscopies 1-gen-2008 Luppi, E; Weissker, H; Bottaro, S; Sottile, F; Veniard, V; Reining, L; Onida, G
Accurate multiple time step in biased molecular simulations 1-gen-2015 Ferrarotti, M. J.; Bottaro, Sandro; Perez Villa, Andrea; Bussi, Giovanni
Automated Force-Field Parametrization Guided by Multisystem Ensemble Averages 1-gen-2018 Cesari, Andrea; Bottaro, Sandro; Bussi, Giovanni
Barnaba: software for analysis of nucleic acid structures and trajectories 1-gen-2019 Bottaro, Sandro; Bussi, Giovanni; Pinamonti, Giovanni; Reißer, Sabine; Boomsma, Wouter; Lindorff-Larsen, Kresten
Biophysical experiments and biomolecular simulations: A perfect match? 1-gen-2018 Bottaro, S; Lindorff-Larsen, K
Combining molecular dynamics simulations with small-angle X-ray and neutron scattering data to study multi-domain proteins in solution 1-gen-2020 Larsen, Ah; Wang, Y; Bottaro, S; Grudinin, S; Arleth, L; Lindorff-Larsen, K
Computer Folding of RNA Tetraloops: Identification of Key Force Field Deficiencies 1-gen-2016 Kührová, P.; Best, R. B.; Bottaro, Sandro; Bussi, Giovanni; Šponer, J.; Otyepka, M.; Banáš, P.
Conformational Ensembles of Noncoding Elements in the SARS-CoV-2 Genome from Molecular Dynamics Simulations 1-gen-2021 Bottaro, Sandro; Bussi, Giovanni; Lindorff-Larsen, Kresten
Conformational ensembles of RNA oligonucleotides from integrating NMR and molecular simulations 1-gen-2018 Bottaro, Sandro; Bussi, Giovanni; Kennedy, Scott D.; Turner, Douglas H.; Lindorff-Larsen, Kresten
Conformational Heterogeneity of UCAAUC RNA Oligonucleotide from Molecular Dynamics Simulations, SAXS, and NMR experiments 1-gen-2022 Bergonzo, Christina; Grishaev, Alexander V; Bottaro, Sandro
Effects and limitations of a nucleobase-driven backmapping procedure for nucleic acids using steered molecular dynamics 1-gen-2018 Poblete, Simón; Bottaro, S; Bussi, Giovanni
An Efficient Null Model for Conformational Fluctuations in Proteins 1-gen-2012 Harder, T; Borg, M; Bottaro, S; Boomsma, W; Olsson, S; Ferkinghoff-Borg, J; Hamelryck, T
Elastic network models for RNA: a comparative assessment with molecular dynamics and SHAPE experiments 1-gen-2015 Pinamonti, G.; Bottaro, S.; Micheletti, C.; Bussi, G.
Empirical corrections to the Amber RNA force field with Target Metadynamics 1-gen-2016 Gil Ley, Alejandro; Bottaro, Sandro; Bussi, Giovanni
Fitting Corrections to an RNA Force Field Using Experimental Data 1-gen-2019 Cesari, A; Bottaro, S; Lindorfr-Larsen, K; Banas, P; Sponer, J; Bussi, G
Formulation of probabilistic models of protein structure in atomic detail using the reference ratio method 1-gen-2014 Valentin, B.; Andreetta, C; Boomsma, W; Bottaro, S; Ferkinghoff-Borg, J; Frellsen, J; Mardia, K.; Tian, P; Hamelryck, T
Free Energy Landscape of GAGA and UUCG RNA Tetraloops 1-gen-2016 Bottaro, Sandro; Banáš, P.; Šponer, J.; Bussi, Giovanni
Generative probabilistic models extend the scope of inferential structure determination 1-gen-2011 Olsson, S; Boomsma, W; Frellsen, J; Bottaro, S; Harder, T; Ferkinghoff-Borg, J; Hamelryck, T
How to learn from inconsistencies: Integrating molecular simulations with experimental data 1-gen-2020 Orioli, S; Larsen, Ah; Bottaro, S; Lindorff-Larsen, K
Integrating molecular simulation and experimental data: a Bayesian/maximum entropy reweighting approach 1-gen-2020 Bottaro, S; Bengtsen, T; Kresten Lindorff-Larsen, K