High-mobility Group Box 1 (HMGB1) is an abundant protein present in all mammalian cells and involved in several processes. During inflammation or tissue damage. HMGB1 is released in the extracellular space and, depending on its redox state, can form a heterocomplex with CXCL12. The heterocomplex acts exclusively via the chemokine receptor CXCR4 enhancing leukocyte recruitment.Here, we used multi-microsecond molecular dynamics (MD) simulations to elucidate the effect of the disulfide bond on the structure and dynamics of HMGB1.The results of the MD simulations show that the presence or lack of the disulfide bond between Cys23 and Cys45 modulates the conformational space explored by HMGB1, making the reduced protein more suitable to form a complex with CXCL12. (C) 2019 The Authors. Published by Elsevier B.V. on behalf of Research Network of Computational and Structural Biotechnology.

Oxidation State Dependent Conformational Changes of HMGB1 Regulate the Formation of the CXCL12/HMGB1 Heterocomplex

Uguccioni, Maria;
2019-01-01

Abstract

High-mobility Group Box 1 (HMGB1) is an abundant protein present in all mammalian cells and involved in several processes. During inflammation or tissue damage. HMGB1 is released in the extracellular space and, depending on its redox state, can form a heterocomplex with CXCL12. The heterocomplex acts exclusively via the chemokine receptor CXCR4 enhancing leukocyte recruitment.Here, we used multi-microsecond molecular dynamics (MD) simulations to elucidate the effect of the disulfide bond on the structure and dynamics of HMGB1.The results of the MD simulations show that the presence or lack of the disulfide bond between Cys23 and Cys45 modulates the conformational space explored by HMGB1, making the reduced protein more suitable to form a complex with CXCL12. (C) 2019 The Authors. Published by Elsevier B.V. on behalf of Research Network of Computational and Structural Biotechnology.
2019
CXCL12
CXCL12, C-X-C motif chemokine 12
CXCR4, C-X-C chemokine receptor type 4
Conformational ensemble
HMGB1
HMGB1, High-mobility Group Box 1
MD, Molecular dynamics
Molecular dynamics
Protein-protein docking
RMSD, Root mean square deviation
RoG, Radius of gyration
SASA, Solvent accessible surface area
TLR2 or TLR4, Toll-like Receptor 2 or 4
ds-HMGB1, Disulfide High-mobility Group Box 1
fr-HMGB1, Full reduced High-mobility Group Box 1
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/11699/59424
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